immuneML.analysis.criteria_matches package¶

Submodules¶

immuneML.analysis.criteria_matches.BooleanType module¶

class immuneML.analysis.criteria_matches.BooleanType.BooleanType(value, names=None, *, module=None, qualname=None, type=None, start=1, boundary=None)[source]¶

Bases: Enum

AND = 0¶

OR = 1¶

immuneML.analysis.criteria_matches.CriteriaMatcher module¶

class immuneML.analysis.criteria_matches.CriteriaMatcher.CriteriaMatcher[source]¶

Bases: object

Takes a data frame (for example, repertoire or feature annotations) and criteria and allowed values as input and returns a list of boolean values indicating a match or not for each row

static evaluate_and(booleans: list)[source]¶

static evaluate_column(data: pandas.Series, name: str) → pandas.Series[source]¶

static evaluate_greater_than(data: pandas.Series, criteria: dict)[source]¶

static evaluate_in(data: pandas.Series, criteria: dict)[source]¶

static evaluate_less_than(data: pandas.Series, criteria: dict)[source]¶

static evaluate_not_in(data: pandas.Series, criteria: dict)[source]¶

static evaluate_not_na(data: pandas.Series, criteria: dict)[source]¶

static evaluate_or(booleans: list)[source]¶

static evaluate_random_n(data: pandas.Series, criteria: dict)[source]¶

static evaluate_top_n(data: pandas.Series, criteria: dict)[source]¶

match(criteria, data)[source]¶

static parse_criteria(criteria, data)[source]¶

immuneML.analysis.criteria_matches.CriteriaTypeInstantiator module¶

class immuneML.analysis.criteria_matches.CriteriaTypeInstantiator.CriteriaTypeInstantiator[source]¶