immuneML.ml_methods package

Subpackages

• immuneML.ml_methods.pytorch_implementations package
  • Submodules
  • immuneML.ml_methods.pytorch_implementations.PyTorchLogisticRegression module
    • PyTorchLogisticRegression
      • PyTorchLogisticRegression.forward()
  • immuneML.ml_methods.pytorch_implementations.PyTorchReceptorCNN module
    • PyTorchReceptorCNN
      • PyTorchReceptorCNN.forward()
      • PyTorchReceptorCNN.get_max_information_gain()
      • PyTorchReceptorCNN.rescale_weights_for_IGM()
  • Module contents
• immuneML.ml_methods.util package
  • Submodules
  • immuneML.ml_methods.util.Util module
    • Util
      • Util.binarize_label_classes()
      • Util.get_immuneML_version()
      • Util.get_train_val_indices()
      • Util.make_binary_class_mapping()
      • Util.make_class_mapping()
      • Util.map_to_new_class_values()
      • Util.map_to_old_class_values()
      • Util.setup_pytorch()
      • Util.subset_encoded_data()
  • Module contents

Submodules

immuneML.ml_methods.AtchleyKmerMILClassifier module

immuneML.ml_methods.DeepRC module

immuneML.ml_methods.KNN module

immuneML.ml_methods.LogisticRegression module

immuneML.ml_methods.MLMethod module

immuneML.ml_methods.PrecomputedKNN module

immuneML.ml_methods.ProbabilisticBinaryClassifier module

immuneML.ml_methods.RandomForestClassifier module

immuneML.ml_methods.ReceptorCNN module

immuneML.ml_methods.SVC module

immuneML.ml_methods.SVM module

immuneML.ml_methods.SklearnMethod module

immuneML.ml_methods.TCRdistClassifier module

Module contents