immuneML.dsl.symbol_table package¶

Submodules¶

immuneML.dsl.symbol_table.SymbolTable module¶

class immuneML.dsl.symbol_table.SymbolTable.SymbolTable[source]¶

Bases: object

Symbol table contains all objects parsed from the specification in the following format:

symbol	symbol_type	item	config
e1	encoding	EncodingObject	{..}	-> SymbolTableEntry object
seq1	preprocessing	[ClonesPerRepertoireFilter(), MetadataRepertoireFilter()]	{..}	-> SymbolTableEntry object

add(symbol: str, symbol_type: SymbolType, item, config: dict = None)[source]¶

contains(symbol)[source]¶

get(symbol)[source]¶

get_by_type(symbol_type: SymbolType) → list[source]¶

get_config(symbol)[source]¶

get_keys_by_type(symbol_type: SymbolType) → list[source]¶

get_signals()[source]¶

immuneML.dsl.symbol_table.SymbolTableEntry module¶

class immuneML.dsl.symbol_table.SymbolTableEntry.SymbolTableEntry(symbol: str, symbol_type: SymbolType, item, config: dict = None)[source]¶: Bases: object

immuneML.dsl.symbol_table.SymbolType module¶

class immuneML.dsl.symbol_table.SymbolType.SymbolType(value, names=None, *, module=None, qualname=None, type=None, start=1, boundary=None)[source]¶

Bases: Enum

DATASET = 3¶

ENCODING = 4¶

INSTRUCTION = 8¶

ML_METHOD = 2¶

MOTIF = 0¶

OUTPUT = 9¶

PREPROCESSING = 7¶

REPORT = 5¶

SIGNAL = 1¶

SIMULATION = 6¶

WEIGHTING = 10¶

immuneML.dsl.symbol_table package¶

Submodules¶

immuneML.dsl.symbol_table.SymbolTable module¶

immuneML.dsl.symbol_table.SymbolTableEntry module¶

immuneML.dsl.symbol_table.SymbolType module¶

Module contents¶