immuneML.presentation package

Subpackages

• immuneML.presentation.html package
  • Submodules
  • immuneML.presentation.html.ClusteringHTMLBuilder module
    • ClusteringHTMLBuilder
      • ClusteringHTMLBuilder.CSS_PATH
      • ClusteringHTMLBuilder.build()
      • ClusteringHTMLBuilder.make_cluster_setting_page()
      • ClusteringHTMLBuilder.make_cluster_setting_pages()
      • ClusteringHTMLBuilder.make_external_performance_tables()
      • ClusteringHTMLBuilder.make_html_map()
      • ClusteringHTMLBuilder.make_internal_performance_table()
  • immuneML.presentation.html.DatasetExportHTMLBuilder module
    • DatasetExportHTMLBuilder
      • DatasetExportHTMLBuilder.CSS_PATH
      • DatasetExportHTMLBuilder.build()
      • DatasetExportHTMLBuilder.make_html_map()
  • immuneML.presentation.html.ExploratoryAnalysisHTMLBuilder module
    • ExploratoryAnalysisHTMLBuilder
      • ExploratoryAnalysisHTMLBuilder.CSS_PATH
      • ExploratoryAnalysisHTMLBuilder.build()
      • ExploratoryAnalysisHTMLBuilder.make_html_map()
  • immuneML.presentation.html.FailedGalaxyHTMLBuilder module
    • FailedGalaxyHTMLBuilder
      • FailedGalaxyHTMLBuilder.CSS_PATH
      • FailedGalaxyHTMLBuilder.build()
  • immuneML.presentation.html.FeasibilitySummaryHTMLBuilder module
    • FeasibilitySummaryHTMLBuilder
      • FeasibilitySummaryHTMLBuilder.CSS_PATH
      • FeasibilitySummaryHTMLBuilder.build()
      • FeasibilitySummaryHTMLBuilder.make_html_map()
    • make_from_report_result()
  • immuneML.presentation.html.GenModelHTMLBuilder module
    • GenModelHTMLBuilder
      • GenModelHTMLBuilder.CSS_PATH
      • GenModelHTMLBuilder.build()
      • GenModelHTMLBuilder.make_html_map()
  • immuneML.presentation.html.HPHTMLBuilder module
    • HPHTMLBuilder
      • HPHTMLBuilder.CSS_PATH
      • HPHTMLBuilder.NUM_DIGITS
      • HPHTMLBuilder.build()
  • immuneML.presentation.html.HTMLBuilder module
    • HTMLBuilder
      • HTMLBuilder.build()
  • immuneML.presentation.html.LIgOSimulationHTMLBuilder module
    • LIgOSimulationHTMLBuilder
      • LIgOSimulationHTMLBuilder.CSS_PATH
      • LIgOSimulationHTMLBuilder.build()
      • LIgOSimulationHTMLBuilder.make_html_map()
      • LIgOSimulationHTMLBuilder.prepare_simulation_details()
    • build_html()
  • immuneML.presentation.html.MLApplicationHTMLBuilder module
    • MLApplicationHTMLBuilder
      • MLApplicationHTMLBuilder.CSS_PATH
      • MLApplicationHTMLBuilder.build()
      • MLApplicationHTMLBuilder.make_html_map()
  • immuneML.presentation.html.MultiDatasetBenchmarkHTMLBuilder module
    • MultiDatasetBenchmarkHTMLBuilder
      • MultiDatasetBenchmarkHTMLBuilder.CSS_PATH
      • MultiDatasetBenchmarkHTMLBuilder.build()
  • immuneML.presentation.html.SubsamplingHTMLBuilder module
    • SubsamplingHTMLBuilder
      • SubsamplingHTMLBuilder.CSS_PATH
      • SubsamplingHTMLBuilder.build()
      • SubsamplingHTMLBuilder.make_html_map()
  • immuneML.presentation.html.Util module
    • Util
      • Util.get_css_content()
      • Util.get_full_specs_path()
      • Util.get_logfile_path()
      • Util.get_table_string_from_csv()
      • Util.get_table_string_from_csv_string()
      • Util.make_dataset_html_map()
      • Util.make_downloadable_zip()
      • Util.to_dict_recursive()
      • Util.update_report_paths()
  • Module contents

Submodules

immuneML.presentation.InstructionPresentation module

class immuneML.presentation.InstructionPresentation.InstructionPresentation(path: pathlib.Path, instruction_class: str, instruction_name: str)

Bases: object

instruction_class: str

instruction_name: str

path: Path

immuneML.presentation.PresentationFactory module

class immuneML.presentation.PresentationFactory.PresentationFactory

Bases: object

static make_presentation_builder(state, presentation_format: PresentationFormat)

immuneML.presentation.PresentationFormat module

class immuneML.presentation.PresentationFormat.PresentationFormat(value, names=None, *, module=None, qualname=None, type=None, start=1, boundary=None)

Bases: Enum

HTML = 'HTML'

immuneML.presentation.TemplateParser module

class immuneML.presentation.TemplateParser.TemplateParser

Bases: object

static parse(template_path: Path, template_map: dict, result_path: Path) → Path

Module contents